CCMI - Presentation

NDEx Workshop

Registration will begin in 2019.

Overview of essential topics such as:

  • Creating an NDEx account and group pages
  • Loading networks to NDEx in several different ways, such as:
    • Notebooks
    • Cytoscape
    • Other NDEx-enabled loaders
  • Controlling network privacy and the degree of indexing for searches


Additional topics related to disseminating networks:

  • How to beautify networks by:
    • Adding annotations
    • Adding a style and a layout using Cytoscape
    • Collecting them in Sets
  • How to use shareable URLs
  • How and when to Showcase networks and network sets
  • Learn how to request a DOI

Demo of the complete full workflow showing how to use NDEx in a peer-reviewed publication

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