CCMI - Workshop

Cancer Cell Map Workshop

The goal of this workshop is to organize a focused group of investigators toward the ultimate challenge of assembling a complete map of the molecular network drivers of cancer. Although many labs are working on cancer networks, coordination between teams could be immensely beneficial in defining and then developing all of the various network types and conditions (cell lines, tissues, environments) that will be required. It is also important to plan how such network maps can be developed into pathway models and used for interpretation of patient genomic data, thus enabling “precision medicine.”

Most of the workshop will be devoted to group discussion and consensus ­building around the goal of cancer cell network mapping. By the end of the two days, we hope to have defined both short and long term goals and, at least approximately, to have divided these goals among the labs of the various participants.


Tuesday, September 27, 2016
The Gladstone Institutes, Conference Room A-B   

  • 1:30 PM Welcome by CCMI Co-Directors, Drs. Trey Ideker and Nevan Krogan
  • 1:40 PM Dr. Joseph Guglielmo, UCSF, Dean of the School of Pharmacy

Session 1: Physical Interactions   

  • 1:50 PM Dr. Nevan Krogan, UCSF
  • 2:10 PM Dr. Peter Jackson, Stanford
  • 2:30 PM Dr. David Hill, Dana-Farber
  • 2:50 PM Dr. David Agard, UCSF
  • 3:10 PM Coffee Break

Session 2: Data Analysis   

  • 3:30 PM Dr. Trey Ideker, UCSD
  • 3:50 PM Dr. Jill Mesirov, UCSD
  • 4:10 PM Dr. Benjamin Gyori, Harvard (Peter Sorger's Lab)
  • 4:30 PM Dr. Ben Raphael, Princeton
  • 4:50 PM Dr. Josh Stuart, UCSC

Session 3: Data Coordination & Standards

  • 5:10 PM Drs. Billur Engin, Dexter Pratt, Barry Demchak, UCSD
  • 5:30 PM Round Table Discussion
  • 6:30 PM Standing Dinner & Happy Hour
  • Atwater Tavern (295 Terry A Francois Blvd., San Francisco, CA 94158) 

Wednesday, September 28, 2016    
The Gladstone Institutes, Conference Room A-B   

  • 8:30 AM Continental Breakfast

Session 4: Genetic Interactions

  • 9:00 AM Dr. Prashant Mali, UCSD
  • 9:20 AM Dr. Stanley Qi, Stanford
  • 9:40 AM Dr. Sourav Bandyopadhyay, UCSF
  • 10:00 AM Dr. Bill Hahn, Dana-Farber
  • 10:20 AM Coffee Break 

Session 4: Genetic Interactions, continued  

  • 10:40 AM Dr. Hannah Carter, UCSD
  • 11:00 AM Dr. Olivier Harismendy, UCSD
  • 11:20 AM Dr. Alan Ashworth, UCSF
  • 11:40 AM Round Table Discussion
  • 12:30 PM Lunch 

Session 5: Translational Research  

  • 1:30 PM Dr. Terrelea Wong, UCSF
  • 1:35 PM Dr. Silvio Gutkind, UCSD
  • 1:55 PM Dr. Joe Califano, UCSD
  • 2:15 PM Dr. Jennifer Grandis, UCSF
  • 2:35 PM Coffee Break

Session 5: Translational Research, continued

  • 2:55 PM Dr. Kevan Shokat, UCSF 
  • 3:15 PM Dr. Trever Bivona, UCSF
  • 3:35 PM Dr. Mariano Alvarez, Columbia (Andrea Califano's Lab)
  • 3:50 PM Dr. Laura van 't Veer, UCSF
  • 4:10 PM Round Table Discussion
  • 5:00 PM Closing comments by Drs. Ideker and Krogan

Share event by Email

ERROR : Field not found : eveny-share-by-email-text